Graphics Session: PTM_quant_run
Loaded dataset: PTM_quant_run_shiny_app_long.tsv
Upload...
Generate Tables and Figures
Download Plots
Select Species
Minimum Prevalence of Ion Quant
Select Groups
Minimum Mean_Mass
Maximum Mean_Mass
Select All Loci
All
Select a Specific Loci
Select Quantitative Analysis Data Type
ProtNorm_IonIntensity
Raw_IonIntensity
Select Quantitative Analysis Group 1
Select Quantitative Analysis Group 2
Normalize to Baseline Group (log2 ratio)
Yes
Select Baseline Group to Normalize Against
A
B
C
Preview
Summary
Quantitative
Data that was read in, subset by currently selected filters
Subjects Per Group
Replicates Per Group
Intensity Summaries
Histogram of mean mass in the data with current filters
Summary by gene, using data with current filters
Heatmap of PSMs by residue
Heatmap of LSMs by residue
Summary by LSMcounting_key
PCA PC1 and PC2
PCA PC2 and PC3
PCA PC1 and PC3
Differential Analysis
Volcano Plot
Heatmap Plot (top 50 most differential results)